Anirban Maitra: Large Scale Efforts at Mapping Dependencies and Multimodal Molecular Profiling Data
Anirban Maitra/LinkedIn

Anirban Maitra: Large Scale Efforts at Mapping Dependencies and Multimodal Molecular Profiling Data

Anirban Maitra, Director of Perlmutter Cancer Center and Professor of Pathology and Medicine at NYU Langone Health, shared on X:

“3 papers in Nature today reflecting large scale efforts at mapping dependencies and multimodal molecular profiling data from a large panel of patient-derived 3D cancer models.

This is DepMap on steroids!”

1. Title: A dependency map enhanced with next-generation 3D cancer models

Authors: James V. Neiswender, Samuel Maffa, Lisa Brenan, Dina ElHarouni, Yejie Yun, Isabella Boyle, Kirsty Wienand, Haider Inam, Tate Bertea, Ashley Anderson, Megan Wong, Matias Enriquez, Evan Lenz, Beatriz Villafranca, Nora Shanks, Mary Hager, Nia Lloyd, Hannah Shadmany, Sarah J. Wie, Harry Liang, Konnor Yunghans, Xiaomeng Zhang, Lauren Golden, Hannah Harris, Serena Day, Philip Montgomery, Samantha Stokes, Ross M. Giglio, Cynthia Hajal, James R. Whittle, Guadalupe Garcia, Caitlin E. Mills, Mehdi Touat, Kristine Pelton, Hongyu Li, Prem Sai Prabhakar, Sonja Herter, Zoe Hoffmann Kamrat, Dan Gui, Julien Dilly, Chen Khuan Wong, Jimmy A. Guo, Sangita Pal, Yossef Baidi, Ryan Johnston, Daniel D. Brown, Sonam Bhatia, Peter S. Winter, Srivatsan Raghavan, Rameen Beroukhim, Eva Colas, David L. Spector, Adam J. Bass, Peter K. Sorger, Yu Chen, Sarah J. Hill, Steffi Oesterreich, Adrian V. Lee, Himisha Beltran, Jesse S. Boehm, Yuen-Yi Tseng, David E. Root, William C. Hahn, Andrew J. Aguirre, Catarina D. Campbell, Keith L. Ligon, Joshua M. Dempster, Tsukasa Shibue, Francisca Vazquez

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2. Title: A compendium of next-generation patient-derived models for diverse cancers

Authors: Dina ElHarouni, Mushriq Al-Jazrawe, Seongmin Choi, Merve Dede, Toshinori Hinoue, Sean A. Misek, Heeju Noh, Luca Zanella, Yuen-Yi Tseng, Hayley E. Francies, Dennis Plenker, Cindy W. Kyi, Julyann Perez-Mayoral, Megan J. Stine, Eva Tonsing-Carter, Rachana Agarwal, Jean Claude Zenklusen, James M. Clinton, Jennifer M. Shelton, Timothy R. Chu, William F. Hooper, Xavi Loinaz, Paula Keskula, Jordan Tagle, Peyton C. Kuhlers, Bahar Tercan, Sylvia F. Boj, Alessandro Vasciaveo, Lorenzo Tomassoni, James M. Crawford, Shawna Walsh, Claire Sinai, Sonam Bhatia, Priya Sridevi, Hardik Patel, Maria Antonietta Cerone, The HCMI Network, Kyle Ellrott, Calvin J. Kuo, Olivier Elemento, Semir Beyaz, Vincenzo Corbo, David L. Spector, Rameen Beroukhim, Martin L. Ferguson, Andrew D. Cherniack, Peter W. Laird, Nicolas Robine, Andrew McPherson, Katherine A. Hoadley, Mathew J. Garnett, David A. Tuveson, Andrea Califano, Paul T. Spellman, Keith L. Ligon, Daniela S. Gerhard, Louis M. Staudt, Jesse S. Boehm

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3. Title: A tumour-derived organoid biobank maps cancer gene dependencies

Authors: C. Herranz-Ors, S. G. Bhosle, A. E. Beck, J. G. R. Gilbert, G. Picco, J. Espejo Valle-Inclan, F. Muyas, S. Valentini, A. E. Andres, R. Ansari, S. Barthorpe, G. Battarbee, C. M. Beaver, S. Brocklesby, J. Cantwell, C. A. Collins, J. Davis, H. G. Dimitrova, J. Doran, E. Efendi, K. Evans, M. Fekry, T. A. Fowler, M. Garcia-Casado, J. A. T. Griffiths, C. Hall, R. Hamer, C. Hardy, Z. Hewitson, E. Hitch, L. Holland, D. A. Jackson, N. Joshi, A. Kavasakali, L. Letchford, H. B. Lightfoot, H. Lingala, I. Mali, K. May, T. Mironenko, J. Morris, C. Pacini, S. Price, G. Robert-Tissot, H. A. Rogers, J. V. Smith, K. Smith, E. Souster, W. J. Spence, F. Thomas, S. F. Vieira, S. Walker, G. Alfonsin, H. Bermingham, H. Coles, D. P. Ennis, A. Freeman, G. Giannone, N. Grehan, E. A. Griffiths, J. Hall, S. L. Lee, E. Y. L. Leung, C. Loreno, C. Millington, A. Mirnezami, B. Nutzinger, K. Orzechowska, C. M. A. Pinna, A. M. Redmond, K. Roberts, S. Roy, D. A. Sanders, P. Taniere, M. Vias, K. Wanigasooriya, OCCAMS Consortium, M. R. Stratton, L. M. Staudt, U. McDermott, J. D. Brenton, I. A. McNeish, A. Biankin, O. J. Sansom, I. Cortes-Ciriano, T. J. Underwood, R. C. Fitzgerald, A. D. Beggs, H. E. Francies, M. J. Garnett

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You can aslo read:

Advanced Method of Growing 3D Models of Children’s Tumours – Children’s Cancer Institute

Anirban Maitra: Large Scale Efforts at Mapping Dependencies and Multimodal Molecular Profiling Data

3D 3D cancer models 3D organoid models A. Biankin A. D. Beggs A. E. Andres A. E. Beck A. Freeman A. Kavasakali A. M. Redmond A. Mirnezami Adam J. Bass Adrian V Lee Alessandro Vasciaveo Andrea Califano Andrew D. Cherniack Andrew J. Aguirre Andrew McPherson Anirban Maitra Ashley Anderson B. Nutzinger Bahar Tercan Beatriz Villafranca C. A. Collins C. Hall C. Hardy C. Herranz-Ors C. Loreno C. M. A. Pinna C. M. Beaver C. Millington C. Pacini Caitlin E. Mills Calvin J. Kuo cancer Catarina D. Campbell Chen Khuan Wong Cindy W. Kyi Claire Sinai Cynthia Hajal D. A. Jackson D. A. Sanders D. P. Ennis Dan Gui Daniel D Brown Daniela S Gerhard David A. Tuveson David E. Root David L. Spector Dennis Plenker DEPMAP Dina Elharouni E. A. Griffiths E. Efendi E. Hitch E. Souster E. Y. L. Leung Eva Colás Eva Tonsing-Carter Evan Lenz F. Muyas F. Thomas Francisca Vazquez G. Alfonsin G. Battarbee G. Giannone G. Picco G. Robert-Tissot Guadalupe Garcia H. A. Rogers H. B. Lightfoot H. Bermingham H. Coles H. E. Francies H. G. Dimitrova H. Lingala Haider Inam Hannah Harris Hannah Shadmany Hardik Patel Harry Liang Hayley E. Francies Heeju Noh Himisha Beltran Hongyu Li I. A. McNeish I. Cortes-Ciriano I. Mali Isabella Boyle J. A. T. Griffiths J. Cantwell J. D. Brenton J. Davis J. Doran J. Espejo Valle-Inclan J. G. R. Gilbert J. Hall J. Morris J. V. Smith James M. Clinton James M. Crawford James R. Whittle James V. Neiswender Jean Claude Zenklusen Jennifer M. Shelton Jesse S. Boehm Jimmy A. Guo Jordan Tagle Joshua M. Dempster Julien Dilly Julyann Perez-Mayoral K. Evans K. May K. Orzechowska K. Roberts K. Smith K. Wanigasooriya Katherine A Hoadley Keith L. Ligon Kirsty Wienand Konnor Yunghans Kristine Pelton Kyle Ellrott L. Holland L. Letchford L. M. Staudt Lauren Golden Lisa Brenan Lorenzo Tomassoni Louis M. Staudt Luca Zanella M. Fekry M. Garcia-Casado M. J. Garnett M. R. Stratton M. Vias Maria Antonietta Cerone Martin L. Ferguson Mary Hager Mathew J. Garnett Matias Enriquez Megan J. Stine Megan Wong Mehdi Touat Merve Dede Mushriq Al-Jazrawe N. Grehan N. Joshi Nia Lloyd Nicolas Robine Nora Shanks O. J. Sansom OCCAMS Consortium Olivier Elemento OncoDaily Oncology P. Taniere Paul T. Spellman Paula Keskula Peter K. Sorger Peter S. Winter Peter W. Laird Peyton C. Kuhlers Philip Montgomery Prem Sai Prabhakar Priya Sridevi R. Ansari R. C. Fitzgerald R. Hamer Rachana Agarwal Rameen Beroukhim Ross M. Giglio Ryan Johnston S. Barthorpe S. Brocklesby S. F. Vieira S. G. Bhosle S. L. Lee S. Price S. Roy S. Valentini S. Walker Samantha Stokes Samuel Maffa Sangita Pal Sarah J. Hill Sarah J. Wie Sean A. Misek Semir Beyaz Seongmin Choi Serena Day Shawna Walsh Sonam Bhatia Sonja Herter Srivatsan Raghavan Steffi Oesterreich Sylvia F. Boj T. A. Fowler T. J. Underwood T. Mironenko Tate Bertea The HCMI Network Timothy R. Chu Toshinori Hinoue Tsukasa Shibue U. McDermott Vincenzo Corbo W. J. Spence William C. Hahn William F. Hooper Xavi Loinaz Xiaomeng Zhang Yejie Yun Yossef Baidi Yu Chen Yuen-Yi Tseng Z. Hewitson Zoe Hoffmann Kamrat